蛋白质结构预测(2)

541 LSLLR

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COMPOSITIONAL ANALYSIS (extremes relative to: swp23s.q)

The composition of the input sequence is evaluated relative to the residue

usage quantile table specified with the `-s species' flag. Low usage in the 1% quantile is indicated by the label -- (e.g., Y-- means that the input sequence uses tyrosine as little as the 1% least tyrosine contain- ing proteins in the reference set); low usage in the 5% quantile is indi- cated by the label `-' (e.g., L-); high usage above the 95% quantile

point is indicated by the label `+' (e.g., A+); and high usage above the

99% quantile point is indicated by the label `++' (e.g., LIVFM++). The

usage is evaluated for all 20 amino acids, positive (KR) and negative (ED)

charge, total charge (KRED), net charge (KR-ED), major hydrophobics

(LVIFM), and the groupings ST, AGP (encoded by CCN, GCN, and GGN codons),

and FIKMNY (encoded by AAN, AUN, UAN, and UUN codons).

A : 65(11.9%); C : 2( 0.4%); D : 37( 6.8%); E : 20( 3.7%); F : 9( 1.7%)

G : 45( 8.3%); H- : 2( 0.4%); I : 30( 5.5%); K : 28( 5.1%); L : 51( 9.4%)

M : 6( 1.1%); N+ : 45( 8.3%); P- : 9( 1.7%); Q : 32( 5.9%); R : 15( 2.8%)

S : 43( 7.9%); T+ : 59(10.8%); V : 33( 6.1%); W : 0( 0.0%); Y : 14( 2.6%)

KR : 43 ( 7.9%); ED : 57 ( 10.5%); AGP : 119 ( 21.8%);

KRED : 100 ( 18.3%); KR-ED : -14 ( -2.6%); FIKMNY : 132 ( 24.2%);

LVIFM : 129 ( 23.7%); ST + : 102 ( 18.7%).

酶切结果预测

PeptideMass

The entered protein is: P06179

The selected enzyme is: Thermolysin

Maximum number of missed cleavages (MC): 0

All cysteines in reduced form.

Methionines have not been oxidized.

Displaying peptides with a mass bigger than 500 Dalton.

Using monoisotopic masses of the occurring amino acid residues and giving peptide masses as [M+H]+.

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You have selected P06179 (P06179) from UniProtKB/Swiss-Prot:

Flagellin (Phase 1-I flagellin)

Chain Flagellin at positions 2 - 495 [Theoretical pI: 4.79 / Mw (average mass): 51480.50 / Mw (monoisotopic mass): 51450.00] mass position #MC modifications peptide sequence 1432.6590 236-249 0 VTGGTGKDGYYEVS 1238.5131 100-111 0 ANSTNSQSDLDS

1130.4783 310-319 0 MSYTDNNGKT

1109.4786 223-231 0 FDDTTGKYY

962.4789 250-258 0 VDKTNGEVT

844.4774 156-162 0 IDIDLKQ

840.4461 345-351 0 INTTKYT

830.4003 82-88 0 LNEINNN

820.3795 335-342 0 ATQNKDGS

818.3203 328-334 0 VGDDYYS

794.3526 352-359 0 ADDGTSKT

793.4566 175-180 0 VQQKYK

776.3784 275-281 0 ATEDVKN

770.3791 483-489 0 ANQVPQN

759.3995 120-125 0 LNEIDR

747.3883 287-293 0 ADLTEAK

741.2937 454-459 0 IEDSDY

733.3363 402-408 0 ATTTENP

719.3570 367-373 0 ADGKTEV

718.3730 210-216 0 LGGTDQK

717.3890 114-119 0 AEITQR

676.3624 18-23 0 LNKSQS

660.3675 422-427 0 LRSDLG

660.3562 217-222 0 IDGDLK

638.3508 376-381 0 IGGKTY

620.2886 460-465 0 ATEVSN

619.3046 126-131 0 VSGQTQ

606.2729 75-80 0 AQTTEG

606.2365 150-155 0 ANDGET

589.2940 13-17 0 LTQNN

562.2831 163-167 0 INSQT